Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015900125.1_cds_XP_016450150.1_44629
CDS Infomation

[gene=LOC107775003] [db_xref=GeneID:107775003] [protein=RNA-binding KH domain-containing protein PEPPER-like] [protein_id=XP_016450150.1] [location=complement(join(15205..15402,15580..15780,18095..18352,18444..18592,18685..18934,22334..22687))] [gbkey=CDS]
Sequence

ATGGCTTCCACAGAACAAACCCAGAACGGCTCTACAATATCACCAGAAACCCTTACAACA
ACCACCGAGACCAAACCAGAGCCTGAAAATCCTCAACAAAAACCAGAAGAAACAACAGAC
CAAGTCCCAGACCCAGTTTCAGTTAACGCTGAACCAGTTCCAGCTACAGAGGTTTCAATA
GAGAAGCCAAAGTGGCCGGGATGGCCCGGGAGTTGTGTATTCAGGATGGTAGTACCTGTG
GTCAAAGTTGGAAGTATAATAGGGCGTAAAGGTGAGCTCGTCAAGAAGATGTGTGAAGAA
ACGGGCGCGAAGATTCGCGTGCTCGATGGGCCTCCTTCTTCTCCTGATCGCATTGTTCTA
ATATCGGGGAAGGAAGAACCTGAGGCAGCATTATCCCCTGCTATGGATGCTGTAATAAGA
GTATTCAAACGTGTTAGTGGACTTGAAGCTGATGGCAACTTACCTGGAGCTGCTGGGGCT
GCATTCTGCTCTATCAGACTACTTGTAGCATCAACACAAGCTGTGAACTTAATAGGAAAA
CAAGGGTCTTTAATCAAGCCTATCCAGCAAACAACTGGTGCCTCCATTCGAGTTCTTTCA
AATGATGAAATGCCAATCTATGCGACTTCGGATGAGAGAATTGTGGAGATTCAGGGTGAA
GCTCTGAAGGTTCTTAAAGCTTTAGAAGCAGTGATTGGGCACCTTAGAAAGTTCTTGGTG
GATCATAGCGTTCTTCCCTTGTTTGAAAAGAGCTACAATACACCTGCCACTCAGACGCAG
GAACGCGAACCTGAACCTTGGTCTGAGAGGACGATGCTTAATACGTCACGGCCTGGACTT
GGCATGGATTATCCTCCTCCAACAAAGAGGGATTCTCTGTTTTCTGAACGTGAAAGCCAG
CTGGATTCACAATATCATCCTCCTGGACTTTCATTGTATGGGCAAGATCCTGGACTTTCT
GGAAATCGTACTTCAGGCCTTGGTCGTGCTGGAAATCCTGTTATTACTCAGATTTCCCAA
ACTGTTCAAATGCAAATACCACTAGCTTATGCAGAAGATATCATTGGCATTGGGGGAGCA
AACATTGCTTATATACGGCGTACTAGTGGTGCCATTCTCACAGTGCAAGAAAGTAGGGGC
TTACCTGATGAAATCACTGTGGAAATAAAAGGGACGTCATCGGAGGTTCAGACAGCTCAG
CAACTTATCCAGGAATTTATGGGTAGCCACAAAGAATCACTTGCAAGCAGTTATGGCCAA
TTAGATACAGGCTTGAGGCAGTCTTCTTACTCTAACCTAGGCAGCGGCTCCTATTCATCT
TCTTCATACGGCGGACAGCAATATGGTGGTGGTGGCGGCGGCGGCTATGGATCATTTGGT
GCTGGAGGGTACAGTAGCTACAGGTCATGA

Peptide Sequence

PEP ID

XP_016450150.1
PEP Infomation

PREDICTED: RNA-binding KH domain-containing protein PEPPER-like [Nicotiana tabacum]
Sequence

MASTEQTQNGSTISPETLTTTTETKPEPENPQQKPEETTDQVPDPVSVNAEPVPATEVSI
EKPKWPGWPGSCVFRMVVPVVKVGSIIGRKGELVKKMCEETGAKIRVLDGPPSSPDRIVL
ISGKEEPEAALSPAMDAVIRVFKRVSGLEADGNLPGAAGAAFCSIRLLVASTQAVNLIGK
QGSLIKPIQQTTGASIRVLSNDEMPIYATSDERIVEIQGEALKVLKALEAVIGHLRKFLV
DHSVLPLFEKSYNTPATQTQEREPEPWSERTMLNTSRPGLGMDYPPPTKRDSLFSERESQ
LDSQYHPPGLSLYGQDPGLSGNRTSGLGRAGNPVITQISQTVQMQIPLAYAEDIIGIGGA
NIAYIRRTSGAILTVQESRGLPDEITVEIKGTSSEVQTAQQLIQEFMGSHKESLASSYGQ
LDTGLRQSSYSNLGSGSYSSSSYGGQQYGGGGGGGYGSFGAGGYSSYRS

Transcript Sequence

Gene sequence data has not been registered.